WormBase Tree Display for CDS: PPA34843
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PPA34843 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 65 | |||
409 | 511 | |||||
2203 | 2286 | |||||
2650 | 2733 | |||||
3001 | 3078 | |||||
3352 | 3393 | |||||
3471 | 3543 | |||||
4259 | 4341 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-56.34 | ||
DB_remark | contains similarity to Pfam domain PF00782 (Dual specificity phosphatase, catalytic domain); contains similarity to Interpro domains IPR020422 (Dual specificity protein phosphatase domain), IPR020417 (), IPR029021 (Protein-tyrosine phosphatase-like), IPR000340 (Dual specificity phosphatase, catalytic domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00273212 | ||||
Corresponding_transcript | PPA34843.1 | |||||
Corresponding_protein | PP64094 | |||||
Corresponding_oligo_set | GPL14372_Probes_4366 | |||||
Microarray_results | GPL14372_Probes_4366 | |||||
RNASeq_FPKM | WBls:0000032 | 47.3314 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 9.3201 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |