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WormBase Tree Display for CDS: PPA34845

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Name Class

PPA34845SMapS_parentSequencePPA_ChrI
StructureSource_exons (13)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S7-57.21
DB_remarkcontains similarity to Pfam domain PF00478 (IMP dehydrogenase / GMP reductase domain); contains similarity to Interpro domains IPR005993 (GMP reductase), IPR013785 (Aldolase-type TIM barrel), IPR001093 (IMP dehydrogenase/GMP reductase)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00273214
Corresponding_transcriptPPA34845.1
Corresponding_proteinPP17262
Corresponding_oligo_setGPL14372_Probes_53559
GPL14372_Probes_53560
Matching_cDNAFG100368Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_53559
GPL14372_Probes_53560
RNASeq_FPKMWBls:00000327.41257From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010113.133From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated