WormBase Tree Display for CDS: PPA34856
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PPA34856 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (28) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-60.17 | ||
DB_remark | contains similarity to Pfam domain PF00096 (Zinc finger, C2H2 type); contains similarity to Interpro domains IPR036236 (Zinc finger C2H2 superfamily), IPR013087 (Zinc finger C2H2-type) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00273225 | ||||
Corresponding_transcript | PPA34856.1 | |||||
Corresponding_protein | PP51305 | |||||
Corresponding_oligo_set | GPL14372_Probes_53633 | |||||
GPL14372_Probes_53634 | ||||||
GPL14372_Probes_53635 | ||||||
Microarray_results | GPL14372_Probes_53633 | |||||
GPL14372_Probes_53634 | ||||||
GPL14372_Probes_53635 | ||||||
RNASeq_FPKM | WBls:0000032 | 5.54597 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |