WormBase Tree Display for CDS: PPA34886
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PPA34886 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 84 | |||
249 | 385 | |||||
483 | 594 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-67.11 | ||
DB_remark | contains similarity to Pfam domain PF01090 (Ribosomal protein S19e); contains similarity to Interpro domains IPR038111 (), IPR036390 (Winged helix DNA-binding domain superfamily), IPR001266 (Small ribosomal subunit protein eS19) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Start_not_found | 1 | |||||
Visible | Gene | WBGene00273255 | ||||
Corresponding_transcript | PPA34886.1 | |||||
Corresponding_protein | PP64478 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |