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WormBase Tree Display for CDS: PPA34890

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Name Class

PPA34890SMapS_parentSequencePPA_ChrI
StructureSource_exons12412
28453342
35203717
40064482
47024843
51745586
56015819
58996519
DB_infoDatabasepristionchus.orgcdsgene-UMM-S7-67.67
DB_remarkcontains similarity to Pfam domains PF03564 (Protein of unknown function (DUF1759)), PF05380 (Pao retrotransposon peptidase), PF18701 (Family of unknown function (DUF5641)); contains similarity to Interpro domains IPR005312 (Protein of unknown function DUF1759), IPR040676 (Domain of unknown function DUF5641), IPR008042 (Retrotransposon, Pao)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00273259
Corresponding_transcriptPPA34890.1
Corresponding_proteinPP63419
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated