WormBase Tree Display for CDS: PPA34895
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PPA34895 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 128 | |||
206 | 275 | |||||
389 | 469 | |||||
659 | 709 | |||||
874 | 928 | |||||
1021 | 1093 | |||||
1116 | 1152 | |||||
1361 | 1445 | |||||
1496 | 1621 | |||||
1745 | 1752 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-68.4 | ||
DB_remark | contains similarity to Pfam domain PF05347 (Complex 1 protein (LYR family)); contains similarity to Interpro domain IPR008011 (Complex 1 LYR protein domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00273264 | ||||
Corresponding_transcript | PPA34895.1 | |||||
Corresponding_protein | PP72425 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |