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WormBase Tree Display for CDS: PPA34909

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Name Class

PPA34909SMapS_parentSequencePPA_ChrI
StructureSource_exons (32)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S7-69.12
DB_remarkcontains similarity to Pfam domains PF00200 (Disintegrin), PF01421 (Reprolysin (M12B) family zinc metalloprotease), PF08516 (ADAM cysteine-rich); contains similarity to Interpro domains IPR024079 (Metallopeptidase, catalytic domain superfamily), IPR036436 (Disintegrin domain superfamily), IPR006586 (ADAM, cysteine-rich domain), IPR001762 (Disintegrin domain), IPR001590 (Peptidase M12B, ADAM/reprolysin)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00273278
Corresponding_transcriptPPA34909.1
Corresponding_proteinPP67760
Corresponding_oligo_setGPL14372_Probes_31454
GPL14372_Probes_31456
Microarray_resultsGPL14372_Probes_31454
GPL14372_Probes_31456
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated