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WormBase Tree Display for CDS: PPA34931

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Name Class

PPA34931SMapS_parentSequencePPA_ChrI
StructureSource_exons (14)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S7-75.32
DB_remarkcontains similarity to Pfam domain PF01063 (Amino-transferase class IV); contains similarity to Interpro domains IPR036038 (Aminotransferase-like, PLP-dependent enzymes), IPR005786 (Branched-chain amino acid aminotransferase II), IPR001544 (Aminotransferase class IV), IPR043131 (Branched-chain-amino-acid aminotransferase-like, N-terminal), IPR043132 (Branched-chain-amino-acid aminotransferase-like, C-terminal)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00273300
Corresponding_transcriptPPA34931.1
Corresponding_proteinPP66979
Corresponding_oligo_setGPL14372_Probes_60118
GPL14372_Probes_60119
Matching_cDNAFE934166Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_60118
GPL14372_Probes_60119
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated