WormBase Tree Display for CDS: PPA34943
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PPA34943 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 156 | |||
195 | 263 | |||||
337 | 487 | |||||
531 | 683 | |||||
855 | 976 | |||||
1030 | 1169 | |||||
2009 | 2111 | |||||
2340 | 2357 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-77.40 | ||
DB_remark | contains similarity to Pfam domain PF00270 (DEAD/DEAH box helicase); contains similarity to Interpro domains IPR011545 (DEAD/DEAH box helicase domain), IPR027417 (P-loop containing nucleoside triphosphate hydrolase) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Start_not_found | 1 | |||||
End_not_found | ||||||
Visible | Gene | WBGene00273312 | ||||
Corresponding_transcript | PPA34943.1 | |||||
Corresponding_protein | PP52387 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |