WormBase Tree Display for CDS: PPA34946
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PPA34946 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 69 | |||
103 | 294 | |||||
1038 | 1148 | |||||
1346 | 1483 | |||||
1601 | 1723 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-78.17 | ||
DB_remark | contains similarity to Pfam domain PF00297 (Ribosomal protein L3); contains similarity to Interpro domains IPR009000 (Translation protein, beta-barrel domain superfamily), IPR000597 (Large ribosomal subunit protein uL3) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Start_not_found | 1 | |||||
End_not_found | ||||||
Visible | Gene | WBGene00273315 | ||||
Corresponding_transcript | PPA34946.1 | |||||
Corresponding_protein | PP53817 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |