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WormBase Tree Display for CDS: PPA35045

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Name Class

PPA35045SMapS_parentSequencePPA_ChrI
StructureSource_exons (29)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S7-97.2
DB_remarkcontains similarity to Pfam domains PF00831 (Ribosomal L29 protein), PF00995 (Sec1 family); contains similarity to Interpro domains IPR001619 (Sec1-like protein), IPR001854 (Large ribosomal subunit protein uL29), IPR043127 (Sec1-like, domain 3a), IPR036049 (Large ribosomal subunit protein uL29 superfamily), IPR043154 (Sec1-like, domain 1), IPR036045 (Sec1-like superfamily), IPR027482 (Sec1-like, domain 2)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00273414
Corresponding_transcriptPPA35045.1
Corresponding_proteinPP59274
Corresponding_oligo_setGPL14372_Probes_54157
GPL14372_Probes_54158
Matching_cDNA (70)
Microarray_resultsGPL14372_Probes_54157
GPL14372_Probes_54158
RNASeq_FPKMWBls:000003256.3483From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001013.69701From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated