WormBase Tree Display for CDS: PPA35049
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PPA35049 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrI | |||
Structure | Source_exons | 186 | 278 | |||
410 | 470 | |||||
637 | 739 | |||||
929 | 962 | |||||
1056 | 1139 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-97.19 | ||
DB_remark | contains similarity to Pfam domain PF00396 (Granulin); contains similarity to Interpro domains IPR000118 (Granulin), IPR039036 (Granulin family), IPR037277 (Granulin superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00273418 | ||||
Corresponding_transcript | PPA35049.1 | |||||
Corresponding_protein | PP62731 | |||||
Corresponding_oligo_set | GPL14372_Probes_54181 | |||||
GPL14372_Probes_54182 | ||||||
GPL14372_Probes_54183 | ||||||
Microarray_results | GPL14372_Probes_54181 | |||||
GPL14372_Probes_54182 | ||||||
GPL14372_Probes_54183 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 21 Feb 2019 09:56:40 | WBPerson4055 | ||||
Remark | [190221 mh6] updated to the latest set provided my MPG | Curator_confirmed | WBPerson18244 | |||
Method | curated |