WormBase Tree Display for CDS: PPA35052
expand all nodes | collapse all nodes | view schema
PPA35052 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (13) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-97.55 | ||
DB_remark | PPA-CLIK-2 protein; contains similarity to Pfam domain PF00402 (Calponin family repeat); contains similarity to Interpro domain IPR000557 (Calponin repeat) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00273421 | ||||
Corresponding_transcript | PPA35052.1 | |||||
Corresponding_protein | PP70057 | |||||
Corresponding_oligo_set | GPL14372_Probes_54161 | |||||
GPL14372_Probes_54163 | ||||||
Microarray_results | GPL14372_Probes_54161 | |||||
GPL14372_Probes_54163 | ||||||
RNASeq_FPKM | WBls:0000032 | 13.3955 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 35.5989 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |