WormBase Tree Display for CDS: PPA35133
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PPA35133 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 129 | |||
183 | 259 | |||||
315 | 461 | |||||
813 | 930 | |||||
991 | 1053 | |||||
1140 | 1253 | |||||
1437 | 1501 | |||||
1905 | 2010 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S10-10.95 | ||
DB_remark | contains similarity to Pfam domains PF10317 (Serpentine type 7TM GPCR chemoreceptor Srd), PF10326 (Serpentine type 7TM GPCR chemoreceptor Str); contains similarity to Interpro domains IPR019421 (7TM GPCR, serpentine receptor class d (Srd)), IPR019428 (7TM GPCR, serpentine receptor class r (Str)) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00273502 | ||||
Corresponding_transcript | PPA35133.1 | |||||
Corresponding_protein | PP63143 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |