WormBase Tree Display for CDS: PPA35223
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PPA35223 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (14) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S10-25.6 | ||
DB_remark | PPA-TTC-4 protein; contains similarity to Interpro domains IPR019734 (Tetratricopeptide repeat), IPR011990 (Tetratricopeptide-like helical domain superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00273592 | ||||
Corresponding_transcript | PPA35223.1 | |||||
Corresponding_protein | PP60018 | |||||
Corresponding_oligo_set | GPL14372_Probes_40466 | |||||
GPL14372_Probes_40467 | ||||||
GPL14372_Probes_40468 | ||||||
Matching_cDNA | AW097708 | Inferred_automatically | transcript_builder.pl | |||
AI989014 | Inferred_automatically | transcript_builder.pl | ||||
Microarray_results | GPL14372_Probes_40466 | |||||
GPL14372_Probes_40467 | ||||||
GPL14372_Probes_40468 | ||||||
RNASeq_FPKM | WBls:0000032 | 6.30548 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 7.44743 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |