Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: PPA35245

expand all nodes | collapse all nodes | view schema

Name Class

PPA35245SMapS_parentSequencePPA_ChrII
StructureSource_exons1123
202336
631717
787866
9771065
11211239
13551429
16301674
DB_infoDatabasepristionchus.orgcdsgene-UMM-S10-27.70
DB_remarkcontains similarity to Pfam domains PF01000 (RNA polymerase Rpb3/RpoA insert domain), PF01193 (RNA polymerase Rpb3/Rpb11 dimerisation domain); contains similarity to Interpro domains IPR036603 (RNA polymerase, RBP11-like subunit), IPR011263 (DNA-directed RNA polymerase, RpoA/D/Rpb3-type), IPR036643 (DNA-directed RNA polymerase, insert domain superfamily), IPR011262 (DNA-directed RNA polymerase, insert domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00273614
Corresponding_transcriptPPA35245.1
Corresponding_proteinPP52467
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated