WormBase Tree Display for CDS: PPA35322
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PPA35322 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 99 | |||
153 | 248 | |||||
289 | 357 | |||||
422 | 469 | |||||
527 | 569 | |||||
1072 | 1135 | |||||
6380 | 6503 | |||||
6615 | 6678 | |||||
6795 | 6867 | |||||
6992 | 7286 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S10-38.21 | ||
DB_remark | contains similarity to Pfam domain PF01852 (START domain); contains similarity to Interpro domains IPR023393 (START-like domain superfamily), IPR002913 (START domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00273691 | ||||
Corresponding_transcript | PPA35322.1 | |||||
Corresponding_protein | PP55570 | |||||
Corresponding_oligo_set | GPL14372_Probes_68942 | |||||
GPL14372_Probes_68943 | ||||||
Microarray_results | GPL14372_Probes_68942 | |||||
GPL14372_Probes_68943 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |