WormBase Tree Display for CDS: PPA35366
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PPA35366 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 48 | |||
239 | 326 | |||||
520 | 612 | |||||
884 | 948 | |||||
1075 | 1137 | |||||
1211 | 1282 | |||||
1463 | 1579 | |||||
1787 | 1855 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S10-45.12 | ||
DB_remark | contains similarity to Pfam domains PF02798 (Glutathione S-transferase, N-terminal domain), PF14497 (Glutathione S-transferase, C-terminal domain); contains similarity to Interpro domains IPR004046 (Glutathione S-transferase, C-terminal), IPR004045 (Glutathione S-transferase, N-terminal), IPR036282 (Glutathione S-transferase, C-terminal domain superfamily), IPR036249 (Thioredoxin-like superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00273735 | ||||
Corresponding_transcript | PPA35366.1 | |||||
Corresponding_protein | PP04215 | |||||
Corresponding_oligo_set | GPL14372_Probes_6299 | |||||
GPL14372_Probes_6301 | ||||||
Microarray_results | GPL14372_Probes_6299 | |||||
GPL14372_Probes_6301 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |