WormBase Tree Display for CDS: PPA35386
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PPA35386 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 93 | |||
330 | 416 | |||||
628 | 696 | |||||
975 | 1055 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S10-48.25 | ||
DB_remark | contains similarity to Interpro domain IPR011001 (Saposin-like) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00273755 | ||||
Corresponding_transcript | PPA35386.1 | |||||
Corresponding_protein | PP63122 | |||||
Corresponding_oligo_set | GPL14372_Probes_81281 | |||||
GPL14372_Probes_81282 | ||||||
Matching_cDNA | FG097839 | Inferred_automatically | transcript_builder.pl | |||
Microarray_results | GPL14372_Probes_81281 | |||||
GPL14372_Probes_81282 | ||||||
RNASeq_FPKM | WBls:0000032 | 9.77465 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 23.0998 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |