WormBase Tree Display for CDS: PPA35429
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PPA35429 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (17) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S10-58.53 | ||
DB_remark | PPA-UPB-1 protein; contains similarity to Pfam domain PF00795 (Carbon-nitrogen hydrolase); contains similarity to Interpro domains IPR003010 (Carbon-nitrogen hydrolase), IPR036526 (Carbon-nitrogen hydrolase superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00273798 | ||||
Corresponding_transcript | PPA35429.1 | |||||
Corresponding_protein | PP65038 | |||||
Corresponding_oligo_set | GPL14372_Probes_65536 | |||||
GPL14372_Probes_65537 | ||||||
GPL14372_Probes_65538 | ||||||
Microarray_results | GPL14372_Probes_65536 | |||||
GPL14372_Probes_65537 | ||||||
GPL14372_Probes_65538 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 19.534 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |