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WormBase Tree Display for CDS: PPA35447

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Name Class

PPA35447SMapS_parentSequencePPA_ChrII
StructureSource_exons1120
179289
442518
700766
9291012
12551371
DB_infoDatabasepristionchus.orgcdsgene-UMM-S10-61.61
DB_remarkPPA-MRPL-20 protein; contains similarity to Pfam domain PF00453 (Ribosomal protein L20); contains similarity to Interpro domains IPR005813 (Large ribosomal subunit protein bL20), IPR035566 (Ribosomal protein bL20, C-terminal)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusConfirmed
VisibleGeneWBGene00273816
Corresponding_transcriptPPA35447.1
Corresponding_proteinPP20626
Corresponding_oligo_setGPL14372_Probes_65589
GPL14372_Probes_65594
Matching_cDNAAA193721Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_65589
GPL14372_Probes_65594
RNASeq_FPKMWBls:000003224.3191From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010138.3102From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated