WormBase Tree Display for CDS: PPA35509
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PPA35509 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 200 | |||
346 | 409 | |||||
497 | 588 | |||||
630 | 735 | |||||
782 | 868 | |||||
892 | 978 | |||||
1234 | 1341 | |||||
1385 | 1492 | |||||
1538 | 1657 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S10-74.45 | ||
DB_remark | contains similarity to Pfam domain PF00450 (Serine carboxypeptidase); contains similarity to Interpro domains IPR029058 (Alpha/Beta hydrolase fold), IPR001563 (Peptidase S10, serine carboxypeptidase) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Start_not_found | 1 | |||||
Visible | Gene | WBGene00273878 | ||||
Corresponding_transcript | PPA35509.1 | |||||
Corresponding_protein | PP59578 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |