Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: PPA35536

expand all nodes | collapse all nodes | view schema

Name Class

PPA35536SMapS_parentSequencePPA_ChrII
StructureSource_exons (16)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S10-79.40
DB_remarkPPA-IRE-1.1 protein; contains similarity to Pfam domains PF00069 (Protein kinase domain), PF06479 (Ribonuclease 2-5A); contains similarity to Interpro domains IPR038357 (KEN domain superfamily), IPR011009 (Protein kinase-like domain superfamily), IPR010513 (KEN domain), IPR000719 (Protein kinase domain), IPR018997 (PUB domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00273905
Corresponding_transcriptPPA35536.1
Corresponding_proteinPP60641
Corresponding_oligo_setGPL14372_Probes_12596
GPL14372_Probes_12597
GPL14372_Probes_59134
Matching_cDNAFG101613Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_12596
GPL14372_Probes_12597
GPL14372_Probes_59134
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001015.69569From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated