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WormBase Tree Display for CDS: PPA35566

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Name Class

PPA35566SMapS_parentSequencePPA_ChrII
StructureSource_exons184
161229
317394
10981196
12531327
13921526
16521708
DB_infoDatabasepristionchus.orgcdsgene-UMM-S10-84.73
DB_remarkcontains similarity to Pfam domain PF00406 (Adenylate kinase); contains similarity to Interpro domains IPR000850 (Adenylate kinase/UMP-CMP kinase), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR006266 (UMP-CMP kinase)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusConfirmed
VisibleGeneWBGene00273935
Corresponding_transcriptPPA35566.1
Corresponding_proteinPP74209
Corresponding_oligo_setGPL14372_Probes_63608
GPL14372_Probes_63610
GPL14372_Probes_63611
GPL14372_Probes_63612
Matching_cDNABI500381Inferred_automaticallytranscript_builder.pl
FG101901Inferred_automaticallytranscript_builder.pl
FG103105Inferred_automaticallytranscript_builder.pl
BI500736Inferred_automaticallytranscript_builder.pl
FE934218Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_63608
GPL14372_Probes_63610
GPL14372_Probes_63611
GPL14372_Probes_63612
RNASeq_FPKMWBls:000003259.6891From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:0000101103.047From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated