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WormBase Tree Display for CDS: PPA35578

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Name Class

PPA35578SMapS_parentSequencePPA_ChrII
StructureSource_exons148
124219
328437
500557
661705
826899
9681056
12321356
DB_infoDatabasepristionchus.orgcdsgene-UMM-S10-86.78
DB_remarkPPA-RAB-21 protein; contains similarity to Pfam domain PF00071 (Ras family); contains similarity to Interpro domains IPR001806 (Small GTPase), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR005225 (Small GTP-binding protein domain), IPR020849 (Small GTPase, Ras-type)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00273947
Corresponding_transcriptPPA35578.1
Corresponding_proteinPP69618
Corresponding_oligo_setGPL14372_Probes_15730
GPL14372_Probes_15733
GPL14372_Probes_15734
Matching_cDNAFG104897Inferred_automaticallytranscript_builder.pl
FG100626Inferred_automaticallytranscript_builder.pl
FG102539Inferred_automaticallytranscript_builder.pl
FG106475Inferred_automaticallytranscript_builder.pl
FG104076Inferred_automaticallytranscript_builder.pl
FG104690Inferred_automaticallytranscript_builder.pl
FG103773Inferred_automaticallytranscript_builder.pl
FG103982Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_15730
GPL14372_Probes_15733
GPL14372_Probes_15734
RNASeq_FPKMWBls:000003225.6115From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:0000101143.717From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated