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WormBase Tree Display for CDS: PPA35593

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Name Class

PPA35593SMapS_parentSequencePPA_ChrII
StructureSource_exons (25)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S10-90.95
DB_remarkcontains similarity to Pfam domains PF01602 (Adaptin N terminal region), PF07718 (Coatomer beta C-terminal region), PF14806 (Coatomer beta subunit appendage platform); contains similarity to Interpro domains IPR029446 (Coatomer beta subunit, appendage platform domain), IPR011710 (Coatomer beta subunit, C-terminal), IPR016460 (Coatomer beta subunit (COPB1)), IPR011989 (Armadillo-like helical), IPR002553 (Clathrin/coatomer adaptor, adaptin-like, N-terminal), IPR016024 (Armadillo-type fold)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00273962
Corresponding_transcriptPPA35593.1
Corresponding_proteinPP56002
Corresponding_oligo_setGPL14372_Probes_63968
GPL14372_Probes_63969
Microarray_resultsGPL14372_Probes_63968
GPL14372_Probes_63969
RNASeq_FPKMWBls:000003214.9929From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010116.3439From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated