WormBase Tree Display for CDS: PPA35608
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PPA35608 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 71 | |||
118 | 258 | |||||
305 | 475 | |||||
523 | 693 | |||||
738 | 1008 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S10-93.33 | ||
DB_remark | contains similarity to Pfam domain PF00250 (Forkhead domain); contains similarity to Interpro domains IPR036390 (Winged helix DNA-binding domain superfamily), IPR036388 (Winged helix-like DNA-binding domain superfamily), IPR001766 (Fork head domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00273977 | ||||
Corresponding_transcript | PPA35608.1 | |||||
Corresponding_protein | PP60651 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 24.5182 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |