WormBase Tree Display for CDS: PPA36213
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PPA36213 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (12) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S41-22.15 | ||
DB_remark | contains similarity to Pfam domain PF10320 (Serpentine type 7TM GPCR chemoreceptor Srsx); contains similarity to Interpro domains IPR019424 (Serpentine type 7TM GPCR chemoreceptor Srsx), IPR000276 (G protein-coupled receptor, rhodopsin-like) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Start_not_found | 1 | |||||
Visible | Gene | WBGene00274582 | ||||
Corresponding_transcript | PPA36213.1 | |||||
Corresponding_protein | PP65170 | |||||
Corresponding_oligo_set | GPL14372_Probes_29949 | |||||
GPL14372_Probes_29950 | ||||||
GPL14372_Probes_29951 | ||||||
Microarray_results | GPL14372_Probes_29949 | |||||
GPL14372_Probes_29950 | ||||||
GPL14372_Probes_29951 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |