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WormBase Tree Display for CDS: PPA36301

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Name Class

PPA36301EvidenceCurator_confirmedWBPerson4055
SMapS_parentSequencePPA_ChrII
StructureSource_exons (18)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S41-35.30
DB_remarkcontains similarity to Pfam domain PF02892 (BED zinc finger); contains similarity to Interpro domains IPR036236 (Zinc finger C2H2 superfamily), IPR003656 (Zinc finger, BED-type)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
End_not_found
VisibleGeneWBGene00274670
Corresponding_transcriptPPA36301.1
Corresponding_proteinPP04448
Corresponding_oligo_setGPL14372_Probes_85257
GPL14372_Probes_85258
GPL14372_Probes_85259
GPL14372_Probes_85260
GPL14372_Probes_85261
Microarray_resultsGPL14372_Probes_85257
GPL14372_Probes_85258
GPL14372_Probes_85259
GPL14372_Probes_85260
GPL14372_Probes_85261
RNASeq_FPKMWBls:00000324.97869From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Last_reviewed03 Jul 2019 16:56:52WBPerson4055
Remark[190703 mh6] This CDS has been updated based on the RNAseq data.Curator_confirmedWBPerson4055
From_analysisRNASeq
Methodcurated