WormBase Tree Display for CDS: PPA36414
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PPA36414 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (14) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S41-51.21 | ||
DB_remark | PPA-RPL-15.1 protein; contains similarity to Pfam domains PF00069 (Protein kinase domain), PF00827 (Ribosomal L15); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR000439 (Large ribosomal subunit protein eL15), IPR024794 (Large ribosomal subunit protein eL15 core domain superfamily), IPR000719 (Protein kinase domain), IPR012678 (Ribosomal protein uL23/eL15/eS24 core domain superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00274783 | ||||
Corresponding_transcript | PPA36414.1 | |||||
Corresponding_protein | PP54071 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |