WormBase Tree Display for CDS: PPA36438
expand all nodes | collapse all nodes | view schema
PPA36438 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 117 | |||
165 | 216 | |||||
260 | 343 | |||||
389 | 441 | |||||
581 | 691 | |||||
817 | 903 | |||||
1156 | 1272 | |||||
1419 | 1520 | |||||
1630 | 1800 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S41-53.14 | ||
DB_remark | contains similarity to Pfam domain PF00067 (Cytochrome P450); contains similarity to Interpro domains IPR001128 (Cytochrome P450), IPR002401 (Cytochrome P450, E-class, group I), IPR036396 (Cytochrome P450 superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00274807 | ||||
Corresponding_transcript | PPA36438.1 | |||||
Corresponding_protein | PP66985 | |||||
Corresponding_oligo_set | GPL14372_Probes_78819 | |||||
GPL14372_Probes_78820 | ||||||
GPL14372_Probes_78821 | ||||||
Microarray_results | GPL14372_Probes_78819 | |||||
GPL14372_Probes_78820 | ||||||
GPL14372_Probes_78821 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |