WormBase Tree Display for CDS: PPA36477

PPA36477 SMap: S_parent: Sequence: PPA_ChrII
  Structure: Source_exons (22)
  DB_info: Database: pristionchus.org cds gene-UMM-S41-56.62
    DB_remark: contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor), PF00105 (Zinc finger, C4 type (two domains)); contains similarity to Interpro domains IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding domain), IPR035500 (Nuclear hormone receptor-like domain superfamily)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00274846
    Corresponding_transcript: PPA36477.1
    Corresponding_protein: PP68352
    Corresponding_oligo_set: GPL14372_Probes_78880
      GPL14372_Probes_78881
      GPL14372_Probes_78882
      GPL14372_Probes_78883
      GPL14372_Probes_78884
      GPL14372_Probes_78885
    Matching_cDNA: EB182772 Inferred_automatically: transcript_builder.pl
    Microarray_results: GPL14372_Probes_78880
      GPL14372_Probes_78881
      GPL14372_Probes_78882
      GPL14372_Probes_78883
      GPL14372_Probes_78884
      GPL14372_Probes_78885
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 3.54908 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
  Method: curated