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WormBase Tree Display for CDS: PPA36489

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Name Class

PPA36489SMapS_parentSequencePPA_ChrII
StructureSource_exons (78)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S41-57.65
DB_remarkcontains similarity to Pfam domains PF00069 (Protein kinase domain), PF00096 (Zinc finger, C2H2 type), PF13445 (RING-type zinc-finger), PF17902 (SH3 domain); contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR041615 (Desmoplakin, SH3 domain), IPR011009 (Protein kinase-like domain superfamily), IPR036236 (Zinc finger C2H2 superfamily), IPR027370 (Zinc finger, RING-type, eukaryotic), IPR000719 (Protein kinase domain), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR013087 (Zinc finger C2H2-type)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00274858
Corresponding_transcriptPPA36489.1
Corresponding_proteinPP51128
Corresponding_oligo_setGPL14372_Probes_78922
GPL14372_Probes_78923
Microarray_resultsGPL14372_Probes_78922
GPL14372_Probes_78923
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001012.35287From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated