WormBase Tree Display for CDS: PPA36500
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PPA36500 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 71 | |||
178 | 238 | |||||
673 | 783 | |||||
984 | 1033 | |||||
1175 | 1232 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S41-59.20 | ||
DB_remark | contains similarity to Pfam domain PF00466 (Ribosomal protein L10); contains similarity to Interpro domains IPR043141 (Large ribosomal subunit protein uL10-like domain superfamily), IPR001790 (Large ribosomal subunit protein uL10), IPR039637 (CCR4-NOT transcription complex subunit 7/8/Pop2), IPR012337 (Ribonuclease H-like superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Start_not_found | 1 | |||||
Visible | Gene | WBGene00274869 | ||||
Corresponding_transcript | PPA36500.1 | |||||
Corresponding_protein | PP60769 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |