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WormBase Tree Display for CDS: PPA36500

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Name Class

PPA36500SMapS_parentSequencePPA_ChrII
StructureSource_exons171
178238
673783
9841033
11751232
DB_infoDatabasepristionchus.orgcdsgene-UMM-S41-59.20
DB_remarkcontains similarity to Pfam domain PF00466 (Ribosomal protein L10); contains similarity to Interpro domains IPR043141 (Large ribosomal subunit protein uL10-like domain superfamily), IPR001790 (Large ribosomal subunit protein uL10), IPR039637 (CCR4-NOT transcription complex subunit 7/8/Pop2), IPR012337 (Ribonuclease H-like superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
Start_not_found1
VisibleGeneWBGene00274869
Corresponding_transcriptPPA36500.1
Corresponding_proteinPP60769
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated