WormBase Tree Display for CDS: PPA36540
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| PPA36540 | SMap | S_parent | Sequence | PPA_ChrII | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 44 | |||
| 132 | 273 | |||||
| 408 | 479 | |||||
| 671 | 757 | |||||
| 828 | 894 | |||||
| 946 | 1121 | |||||
| DB_info | Database | pristionchus.org | cds | gene-UMM-S41-61.78 | ||
| DB_remark | contains similarity to Pfam domain PF01060 (Transthyretin-like family); contains similarity to Interpro domains IPR038479 (Transthyretin-like superfamily), IPR001534 (Transthyretin-like) | |||||
| Origin | From_laboratory | RS | ||||
| Species | Pristionchus pacificus | |||||
| Properties | Coding | CDS | ||||
| CDS_predicted_by | pristionchus.org | |||||
| Prediction_status | Predicted | |||||
| Start_not_found | 1 | |||||
| Visible | Gene | WBGene00274909 | ||||
| Corresponding_transcript | PPA36540.1 | |||||
| Corresponding_protein | PP70848 | |||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
| Method | curated |
