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WormBase Tree Display for CDS: PPA36542

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Name Class

PPA36542SMapS_parentSequencePPA_ChrII
StructureSource_exons (37)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S41-61.80
DB_remarkcontains similarity to Pfam domain PF13920 (Zinc finger, C3HC4 type (RING finger)); contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
End_not_found
VisibleGeneWBGene00274911
Corresponding_transcriptPPA36542.1
Corresponding_proteinPP61718
Corresponding_oligo_setGPL14372_Probes_79033
GPL14372_Probes_79034
GPL14372_Probes_79035
GPL14372_Probes_79036
GPL14372_Probes_79037
GPL14372_Probes_79038
GPL14372_Probes_79039
Matching_cDNAEB184078Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_79033
GPL14372_Probes_79034
GPL14372_Probes_79035
GPL14372_Probes_79036
GPL14372_Probes_79037
GPL14372_Probes_79038
GPL14372_Probes_79039
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001012.62012From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated