WormBase Tree Display for CDS: PPA36959
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PPA36959 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 84 | |||
311 | 352 | |||||
395 | 453 | |||||
498 | 666 | |||||
713 | 865 | |||||
1155 | 1276 | |||||
1398 | 1464 | |||||
1531 | 1641 | |||||
1710 | 2027 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S57-12.63 | ||
DB_remark | contains similarity to Pfam domain PF00646 (F-box domain); contains similarity to Interpro domains IPR036047 (F-box-like domain superfamily), IPR001810 (F-box domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00275328 | ||||
Corresponding_transcript | PPA36959.1 | |||||
Corresponding_protein | PP71292 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |