WormBase Tree Display for CDS: PPA36973
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PPA36973 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 162 | |||
219 | 308 | |||||
354 | 419 | |||||
468 | 563 | |||||
606 | 659 | |||||
704 | 829 | |||||
875 | 1008 | |||||
1060 | 1138 | |||||
1179 | 1277 | |||||
1327 | 1413 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S57-16.65 | ||
DB_remark | contains similarity to Pfam domain PF08719 (NADAR domain); contains similarity to Interpro domains IPR037238 (YbiA-like superfamily), IPR012816 (NADAR) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00275342 | ||||
Corresponding_transcript | PPA36973.1 | |||||
Corresponding_protein | PP66538 | |||||
Corresponding_oligo_set | GPL14372_Probes_17701 | |||||
GPL14372_Probes_17702 | ||||||
GPL14372_Probes_17703 | ||||||
GPL14372_Probes_17704 | ||||||
Microarray_results | GPL14372_Probes_17701 | |||||
GPL14372_Probes_17702 | ||||||
GPL14372_Probes_17703 | ||||||
GPL14372_Probes_17704 | ||||||
RNASeq_FPKM | WBls:0000032 | 20.4305 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |