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WormBase Tree Display for CDS: PPA36993

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Name Class

PPA36993SMapS_parentSequencePPA_ChrI
StructureSource_exons (11)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S57-19.78
DB_remarkcontains similarity to Pfam domains PF00017 (SH2 domain), PF00018 (SH3 domain), PF14604 (Variant SH3 domain); contains similarity to Interpro domains IPR036860 (SH2 domain superfamily), IPR036028 (SH3-like domain superfamily), IPR001452 (SH3 domain), IPR000980 (SH2 domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00275362
Corresponding_transcriptPPA36993.1
Corresponding_proteinPP56179
Corresponding_oligo_setGPL14372_Probes_62382
GPL14372_Probes_62383
Matching_cDNAFG096804Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_62382
GPL14372_Probes_62383
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001017.49131From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated