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WormBase Tree Display for CDS: PPA37012

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Name Class

PPA37012SMapS_parentSequencePPA_ChrI
StructureSource_exons (13)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S57-24.1
DB_remarkcontains similarity to Pfam domain PF07934 (8-oxoguanine DNA glycosylase, N-terminal domain); contains similarity to Interpro domains IPR023170 (Helix-hairpin-helix, base-excision DNA repair, C-terminal), IPR012904 (8-oxoguanine DNA glycosylase, N-terminal), IPR003265 (HhH-GPD domain), IPR011257 (DNA glycosylase)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00275381
Corresponding_transcriptPPA37012.1
Corresponding_proteinPP66561
Corresponding_oligo_setGPL14372_Probes_55090
GPL14372_Probes_55091
GPL14372_Probes_55092
Microarray_resultsGPL14372_Probes_55090
GPL14372_Probes_55091
GPL14372_Probes_55092
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010114.59From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated