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WormBase Tree Display for CDS: PPA37073

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Name Class

PPA37073EvidenceCurator_confirmedWBPerson4055
SMapS_parentSequencePPA_ChrI
StructureSource_exons (12)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S57-39.0
DB_remarkcontains similarity to Pfam domain PF07534 (TLD); contains similarity to Interpro domain IPR006571 (TLDc domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00275442
Corresponding_transcriptPPA37073.1
Corresponding_proteinPP75120
Corresponding_oligo_setGPL14372_Probes_55525
GPL14372_Probes_55526
GPL14372_Probes_55527
GPL14372_Probes_55528
Matching_cDNAFE940386Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_55525
GPL14372_Probes_55526
GPL14372_Probes_55527
GPL14372_Probes_55528
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Last_reviewed04 Jul 2019 13:05:03WBPerson4055
Remark[190704 mh6] This CDS has been updated based on the RNAseq data.Curator_confirmedWBPerson4055
From_analysisRNASeq
Methodcurated