WormBase Tree Display for CDS: PPA37073
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PPA37073 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrI | |||
Structure | Source_exons (12) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S57-39.0 | ||
DB_remark | contains similarity to Pfam domain PF07534 (TLD); contains similarity to Interpro domain IPR006571 (TLDc domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00275442 | ||||
Corresponding_transcript | PPA37073.1 | |||||
Corresponding_protein | PP75120 | |||||
Corresponding_oligo_set | GPL14372_Probes_55525 | |||||
GPL14372_Probes_55526 | ||||||
GPL14372_Probes_55527 | ||||||
GPL14372_Probes_55528 | ||||||
Matching_cDNA | FE940386 | Inferred_automatically | transcript_builder.pl | |||
Microarray_results | GPL14372_Probes_55525 | |||||
GPL14372_Probes_55526 | ||||||
GPL14372_Probes_55527 | ||||||
GPL14372_Probes_55528 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 04 Jul 2019 13:05:03 | WBPerson4055 | ||||
Remark | [190704 mh6] This CDS has been updated based on the RNAseq data. | Curator_confirmed | WBPerson4055 | |||
From_analysis | RNASeq | |||||
Method | curated |