WormBase Tree Display for CDS: PPA37084
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PPA37084 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (20) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S57-41.26 | ||
DB_remark | contains similarity to Pfam domain PF01734 (Patatin-like phospholipase); contains similarity to Interpro domains IPR016035 (Acyl transferase/acyl hydrolase/lysophospholipase), IPR033562 (Patatin-like phospholipase domain-containing protein), IPR002641 (Patatin-like phospholipase domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
End_not_found | ||||||
Visible | Gene | WBGene00275453 | ||||
Corresponding_transcript | PPA37084.1 | |||||
Corresponding_protein | PP65107 | |||||
Corresponding_oligo_set | GPL14372_Probes_55604 | |||||
GPL14372_Probes_55606 | ||||||
GPL14372_Probes_55608 | ||||||
GPL14372_Probes_55613 | ||||||
Microarray_results | GPL14372_Probes_55604 | |||||
GPL14372_Probes_55606 | ||||||
GPL14372_Probes_55608 | ||||||
GPL14372_Probes_55613 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 2.82883 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |