WormBase Tree Display for CDS: PPA37089
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PPA37089 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 120 | |||
248 | 306 | |||||
911 | 986 | |||||
1180 | 1236 | |||||
1359 | 1426 | |||||
1557 | 1660 | |||||
1917 | 1930 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S57-43.5 | ||
DB_remark | contains similarity to Interpro domains IPR000235 (Small ribosomal subunit protein uS7), IPR036823 (Small ribosomal subunit protein uS7 domain superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Start_not_found | 1 | |||||
Visible | Gene | WBGene00275458 | ||||
Corresponding_transcript | PPA37089.1 | |||||
Corresponding_protein | PP60555 | |||||
Corresponding_oligo_set | GPL14372_Probes_85057 | |||||
GPL14372_Probes_85058 | ||||||
Microarray_results | GPL14372_Probes_85057 | |||||
GPL14372_Probes_85058 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |