WormBase Tree Display for CDS: PPA37694
expand all nodes | collapse all nodes | view schema
PPA37694 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrI | |||
Structure | Source_exons (11) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S71-1.36 | ||
DB_remark | contains similarity to Pfam domain PF00075 (RNase H); contains similarity to Interpro domains IPR012337 (Ribonuclease H-like superfamily), IPR036397 (Ribonuclease H superfamily), IPR002156 (Ribonuclease H domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00276063 | ||||
Corresponding_transcript | PPA37694.1 | |||||
Corresponding_protein | PP69406 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 26.375 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 16 Sep 2019 14:47:01 | WBPerson4055 | ||||
Remark | [190221 mh6] updated to the latest set provided my MPG | Curator_confirmed | WBPerson18244 | |||
[190916 mh6] This CDS has been updated based on the RNAseq data. | Curator_confirmed | WBPerson4055 | ||||
From_analysis | RNASeq | |||||
Method | curated |