WormBase Tree Display for CDS: PPA37724
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| PPA37724 | SMap | S_parent | Sequence | PPA_ChrI | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (18) | |||||
| DB_info | Database | pristionchus.org | cds | gene-UMM-S71-5.18 | ||
| DB_remark | PPA-PFK-1.1.2 protein; contains similarity to Pfam domain PF00365 (Phosphofructokinase); contains similarity to Interpro domains IPR022953 (ATP-dependent 6-phosphofructokinase), IPR035966 (Phosphofructokinase superfamily), IPR000023 (Phosphofructokinase domain) | |||||
| Origin | From_laboratory | RS | ||||
| Species | Pristionchus pacificus | |||||
| Properties | Coding | CDS | ||||
| CDS_predicted_by | pristionchus.org | |||||
| Prediction_status | Partially_confirmed | |||||
| Visible | Gene | WBGene00276093 | ||||
| Corresponding_transcript | PPA37724.1 | |||||
| Corresponding_protein | PP52976 | |||||
| Corresponding_oligo_set | GPL14372_Probes_43159 | |||||
| GPL14372_Probes_49140 | ||||||
| GPL14372_Probes_49141 | ||||||
| GPL14372_Probes_49142 | ||||||
| GPL14372_Probes_49143 | ||||||
| GPL14372_Probes_49144 | ||||||
| Matching_cDNA | FE941581 | Inferred_automatically | transcript_builder.pl | |||
| Microarray_results | GPL14372_Probes_43159 | |||||
| GPL14372_Probes_49140 | ||||||
| GPL14372_Probes_49141 | ||||||
| GPL14372_Probes_49142 | ||||||
| GPL14372_Probes_49143 | ||||||
| GPL14372_Probes_49144 | ||||||
| RNASeq_FPKM | WBls:0000032 | 6.83579 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
| WBls:0000101 | 10.7644 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
| Method | curated |
