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WormBase Tree Display for CDS: PPA37749

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Name Class

PPA37749SMapS_parentSequencePPA_ChrI
StructureSource_exons (17)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S71-8.32
DB_remarkPPA-DMD-8.1 protein; contains similarity to Pfam domains PF00017 (SH2 domain), PF00751 (DM DNA binding domain), PF14604 (Variant SH3 domain); contains similarity to Interpro domains IPR036860 (SH2 domain superfamily), IPR036407 (DM DNA-binding domain superfamily), IPR036028 (SH3-like domain superfamily), IPR001275 (DM DNA-binding domain), IPR001452 (SH3 domain), IPR000980 (SH2 domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00276118
Corresponding_transcriptPPA37749.1
Corresponding_proteinPP67112
Corresponding_oligo_setGPL14372_Probes_49305
GPL14372_Probes_49306
GPL14372_Probes_49307
Microarray_resultsGPL14372_Probes_49305
GPL14372_Probes_49306
GPL14372_Probes_49307
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001014.08509From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated