WormBase Tree Display for CDS: PPA37792
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PPA37792 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (29) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S71-17.53 | ||
DB_remark | PPA-PYGL-1.2 protein; contains similarity to Pfam domain PF00343 (Carbohydrate phosphorylase); contains similarity to Interpro domains IPR011833 (Glycogen/starch/alpha-glucan phosphorylase), IPR000811 (Glycosyl transferase, family 35) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00276161 | ||||
Corresponding_transcript | PPA37792.1 | |||||
Corresponding_protein | PP51226 | |||||
Corresponding_oligo_set (11) | ||||||
Matching_cDNA | FG098839 | Inferred_automatically | transcript_builder.pl | |||
AW097095 | Inferred_automatically | transcript_builder.pl | ||||
Microarray_results (11) | ||||||
RNASeq_FPKM | WBls:0000032 | 19.321 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 3.04231 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |