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WormBase Tree Display for CDS: PPA37792

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Name Class

PPA37792SMapS_parentSequencePPA_ChrI
StructureSource_exons (29)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S71-17.53
DB_remarkPPA-PYGL-1.2 protein; contains similarity to Pfam domain PF00343 (Carbohydrate phosphorylase); contains similarity to Interpro domains IPR011833 (Glycogen/starch/alpha-glucan phosphorylase), IPR000811 (Glycosyl transferase, family 35)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00276161
Corresponding_transcriptPPA37792.1
Corresponding_proteinPP51226
Corresponding_oligo_set (11)
Matching_cDNAFG098839Inferred_automaticallytranscript_builder.pl
AW097095Inferred_automaticallytranscript_builder.pl
Microarray_results (11)
RNASeq_FPKMWBls:000003219.321From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001013.04231From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated