WormBase Tree Display for CDS: PPA37830
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PPA37830 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 85 | |||
134 | 229 | |||||
274 | 380 | |||||
425 | 536 | |||||
579 | 616 | |||||
662 | 769 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S71-24.1 | ||
DB_remark | contains similarity to Pfam domain PF01549 (ShK domain-like); contains similarity to Interpro domain IPR003582 (ShKT domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00276199 | ||||
Corresponding_transcript | PPA37830.1 | |||||
Corresponding_protein | PP53759 | |||||
Corresponding_oligo_set | GPL14372_Probes_50417 | |||||
GPL14372_Probes_50418 | ||||||
Microarray_results | GPL14372_Probes_50417 | |||||
GPL14372_Probes_50418 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |