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WormBase Tree Display for CDS: PPA37868

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Name Class

PPA37868EvidenceCurator_confirmedWBPerson4055
SMapS_parentSequencePPA_ChrI
StructureSource_exons (17)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S71-32.18
DB_remarkPPA-HPO-31 protein; contains similarity to Pfam domains PF01743 (Poly A polymerase head domain), PF12627 (Probable RNA and SrmB- binding site of polymerase A); contains similarity to Interpro domains IPR002646 (Poly A polymerase, head domain), IPR043519 (Nucleotidyltransferase superfamily), IPR032828 (tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00276237
Corresponding_transcriptPPA37868.1
Corresponding_proteinPP75483
Corresponding_oligo_setGPL14372_Probes_52502
GPL14372_Probes_52503
GPL14372_Probes_52504
Microarray_resultsGPL14372_Probes_52502
GPL14372_Probes_52503
GPL14372_Probes_52504
RNASeq_FPKMWBls:000003219.1526From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010125.8521From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Last_reviewed08 Nov 2019 10:07:46WBPerson4055
Remark[191108 mh6] This CDS has been updated based on the RNAseq data.Curator_confirmedWBPerson4055
From_analysisRNASeq
Methodcurated