WormBase Tree Display for CDS: PPA37885
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PPA37885 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 36 | |||
80 | 170 | |||||
288 | 376 | |||||
567 | 696 | |||||
829 | 921 | |||||
1854 | 1978 | |||||
2224 | 2393 | |||||
2471 | 2474 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S71-34.13 | ||
DB_remark | contains similarity to Pfam domain PF00999 (Sodium/hydrogen exchanger family); contains similarity to Interpro domains IPR018422 (Cation/H+ exchanger, CPA1 family), IPR006153 (Cation/H+ exchanger), IPR004709 (Na+/H+ exchanger) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00276254 | ||||
Corresponding_transcript | PPA37885.1 | |||||
Corresponding_protein | PP69002 | |||||
Corresponding_oligo_set | GPL14372_Probes_10847 | |||||
Microarray_results | GPL14372_Probes_10847 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |